Latest Posts

All Posts

CrispyCrunch: High-throughput Design and Analysis of CRISPR+HDR Experiments

Posted by Guest Blogger on Feb 7, 2019 9:16:20 AM

This post was contributed by Greg Dingle, a software engineer with the Chan Zuckerberg Initiative.

We hereby announce the general availability of new a tool for CRISPR scientists––CrispyCrunch! CrispyCrunch is a web app that helps scientists design and analyze batches of CRISPR samples.

We invite you to jump in and try it out, or take a look at our live examples: experiment or analysis. In the rest of this article, we'll explain the thinking behind the tool, its key features, how it works, and how to use it.

Read More >

Topics: CRISPR

CRISPR 101: CRISPR-mediated Plant Base Editors

Posted by Guest Blogger on Jan 3, 2019 8:35:29 AM

This post was contributed by Kutubuddin Molla, a Fulbright Visiting Scholar at the Pennsylvania State University.

Imagine you are dealing with a defective gene, Xm, the sequence of which is identical to the correct gene, Xw, except for a single base. If you heard about CRISPR, one question probably comes to mind: can CRISPR be applied to fix the defective base precisely?

Until 2016, precise single base changes were only possible through exploiting the homology-directed repair (HDR) pathway which occurs in cells at low frequencies and relies on the efficient delivery of donor DNA to facilitate repair. Since the development of CRISPR-mediated base editing (BE), these types of repairs can now be done more efficiently than before. A base editor precisely changes a single base with an efficiency typically ranging from 25-75%, while the success of precise change via HDR limited to 0-5%. This blog post covers a brief review of different basic BE technologies and their adaptation for plant genome editing.
Read More >

Topics: CRISPR, CRISPR 101

The CRISPR babies saga shows the need for action, not more delays

Posted by Guest Blogger on Dec 20, 2018 8:15:12 AM

This post was contributed by Kelly Hills, founding bioethicist of Rogue Bioethics.

On November 25, the MIT Technology Review dropped a bombshell report. A scientist working in China was using CRISPR/Cas9 in an attempt to create gene-edited babies. Several hours later, the scientist, Jiankiu He, confirmed that two such edited babies were born in a twin live birth several weeks previously. While this claim has yet to be independently verified, the watching world erupted in controversy. Briefly, there are two overlapping, valid critiques being offered of He’s work:

  • CRISPR/Cas9 genome editing is not far enough along, scientifically, to be doing in humans;
  • We have not had a broad, public conversation or consensus around the ethics of genome editing.
Read More >

Topics: CRISPR

What's New in CRISPR - Winter 2018

Posted by Jennifer Tsang on Dec 18, 2018 8:17:40 AM

In this quarterly blog series, we’ll highlight a few of the new CRISPR plasmids available at Addgene. We will still periodically focus on specific CRISPR plasmid tools more in-depth, but we hope that this blog series will help you find new CRISPR tools for your research.

 

 

Read More >

Topics: CRISPR

CRISPR-Cas14: a family of small DNA-targeting enzymes enabling high-fidelity SNP genotyping

Posted by Benoit Giquel on Nov 29, 2018 8:53:18 AM

Before being adapted by scientists to edit the genome of virtually any organisms on this planet, CRISPR-Cas systems were merely adaptive immune systems that provide bacteria protection against infectious agents. Several enzymes behind this immunity have already been discovered and studied but it is only the tip of the iceberg as it has been predicted that many others are still unknown.

In this quest to discover new and maybe more efficient Cas systems, Jennifer Doudna’s lab analyzed metagenomic datasets to try to determine whether simpler and maybe smaller Cas systems could exist in nature.

Read More >

Topics: CRISPR

Click here to subscribe to the Addgene Blog
 
Subscribe

 

Recent Posts